Online resources for teaching zoology

We’re pretty spoilt for zoology teaching resources at Trinity College Dublin. That’s because we have a quite complete teaching collection in our zoology museum. A superfluous resource for universities in modern times or a relict of imperialism? That’s not important now. What’s important is that our collection is in integral part of our teaching program and provides students with a hands-on opportunity to see representative specimens from across the tree of life.

As off-campus learning is likely to be implemented in the upcoming academic year, our students won’t have access to our museum specimens and we have to find an alternative to hands-on material to teach our zoology practicals.

Cartoon by Will McPhail, New Yorker

Fortunately, the pandemic has renewed the importance of material for distance learning.

Here’s a list of online resources that students can access from home. By no means do they replace hands-on material, but they can supplement zoology teaching now and into the future and are better than nothing. I’ll be updating this list as I find more links and I’d like to hear from you if you’ve found a good resource.

Encyclopedia of life… and other databases

EOL is a database of life. It has entries and photographs for lots of species. Similar databases are Atlas of Living Australia, GBIF, National Biodiversity Data Centre (Ireland) and Explore Your Shore (Ireland). They have occurrence records, photos or identification resources.

First Animals

3D models of fossil animals by the Museum of Natural History, University of Oxford. You can view them, download them or print them if you have a 3D printer.

Twitter

Lots of scientists are on twitter and they have been sharing photographs or videos of morphological or anatomical adaptations of animals. Here are some accounts to follow:

@PaoloViscardi – Dr Paolo Viscardi is the Zoology Curator of the National Museum of Ireland.
@JackDAshby – Dr Jack Ashby is the manager of the Cambridge University Zoology Museum
Here are some examples:

Teeth: Marine fish teeth, seal teeth, see the hashtag #ToothyTuesday
Marine invertebrate larvae
Thread about turtles
Key to bumblebees of Ireland
Skulls: see hashtag #DrBobSkulls with Prof Alice Roberts (@theAliceRoberts), Dr Andrew Smith (@Tahuayo) & Prof Ben Garrod (@Ben_garrod), or #GuessTheSkull by Dr Paolo Viscardi (@PaoloViscardi). Examples: rodent vs lagomorph skull, How to identify mammal skulls (UK)
Use of eddies for efficient fish locomotion

3D scans of animal skulls and skeletons

See this collection by Daniel Paluh (@danpaluh on Twitter) that’s part of the OVert: Open Exploration of Vertebrate Diversity in 3D and available on Morphosource

Love early tetrapods? Here are 3D scans of various extant and extint fish limbs for a paper by Tom Stewart et al.

Or get your students to make their own skeletons!

Ants!

Who can say no to ants?

Digitized natural history collections

Several museums have digitized (or are in the process of digitizing) their collection. Here are some of them:
Museum Victoria (Australia)
Natural History Museum (UK), NHM images, NHM Data portal
Australian National Insect Collection has a number of identification resources and collections online
Haswell Museum, (the University of Sydney Zoology Museum, Australia) has photographs of specimens and virtual slides
Or take a virtual tour of the Smithsonian National Museum of Natural History
And iDigiBio has a few resources of undergrads
The Grant Museum (UCL, UK) has an online handbook of Chordates (Vertebrates)
I liked the educational resources of the Florida Museum. Their fish stuff covers a lot of the same material we do in lectures and includes a shark dissection!

iNaturalist

Instead of bringing specimens to students, why not bring students to specimens? Get them to record local biodiversity, try out their identification skills and upload them to iNaturalist.

Arludo

Arludo makes educational games (in Augmented Reality!) about evolutionary and behavioural ecology.

Blogs, news articles or press releases

Lots of scientists or societies have blogs that are written for a general audience that would be accessible to undergraduates and are meant to be more engaging than reading research papers. Some of them are about a topic of interest, other are about a recently published paper. For example, the plain summaries of the BES journals. Here are some examples of blogs about zoology topics:
Dr Paolo Viscardi’s blog has lots of information about identifying skulls (see the Twitter section). Here’s an example.
The evolution of vertebrate intercostal breathing (Phys.org)
How seals dive (The Conversation)
The evolution of the spine (Science Magazine press release)
Ecology is not a dirty word. Dr Manu Saunders writes thought-provoking blogs about a range of topics in ecology.

How about some Shiny apps?

Simulating hybrid zones with assortative mating. Made by Dr Ethan Linck (@ethanblinck) based on a paper by Dr Darren Irwin

Soil microclimate modelling. A Shiny implementation of the microclimate model of NicheMapR by Prof Michael Kearney

Microclimate-driven ectotherm heat budget model. A Shiny implementation of the ectotherm model of NicheMapR

Linkage disequilibrium. App by Dr CJ Battey (@cj_battey)

Or a mobile AR app?

Dr Christian Damsgaard made a free AR app available on the apple store based on their review about air breathing fishes.

And now for something different…

A video of Jensen’s inequality by Dr Joey Bernhardt (@JoeyBernhardt)

A book on population and quantitative genetics by Dr Graham Coop

A marine heat wave tracker

A flowchart of molecular ecology from the Molecular Ecologist blog

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